Yes, the canoes can carry people. (In spite of the fact that they look like one man kayaks. The graphics for this will be changed in the next version after 0.3 and an actual kayak unit has been added, which acts as a scout and doesn't get bad results from the "goody islands".)
It also didn't actually hurt much as the hunter unit has a large built-in bonus vs. these animal units and also has two hunter promotions which give another +100% or so, and is on a hill with jungle for another 75% defensive bonus so his effective defensive strength was probably something up close to 15. He pretty well cleared them out, capturing some of them and killing the rest for food and production, if I recall correctly.
G-E
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