Normally the Circle Pad Pro (dual stick controls) are incompatible with the Nintendo 3DS Emulator 'Citra' . The Game will freeze when attempting to enable. These save games circumvent this glitch by having the CCP activated via a real 3DS and then the saves transferred to PC. Simply place the savedata over your preexisting one in Citra. There is one for Normal, Hard and Extreme. All at the very beginning of the game. You can edit sensitivity etc, but DO NOT attempt turning the CPP back off and on or your game will crash.
Do you have any new game plus saves? Citra keeps closing after the last scene for me.
I will reply to this when I do. I'm currently playing through the game again.
Gamebanana.com