Since it's not actually setup for use in D2SE, You can open the D2SE folder in the Diablo 2 directory and go to the Cores folder and find 1.09d folder(H:\Games\Diablo II\D2SE\CORES\1.09d) and put the mods files in there. When you launch D2SE navagate to version 1.09 and click launch.. It will be the mod instead :)
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