Some ships have had their hardpoint layouts improved, also marauder missile cruiser has been heavily improved.
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This mod adds many new units to all sides, makes the Black Sun Pirates playable, enhances some space units, unlocks a few space units, and generally makes a wider gaming experience.
E_Research_Center is key in ways the game uses to determine whether the Empire should upgrade its tech, I think that by giving pirates access to building it it made the game decide not to use Empire ai altogether. I will begin by reexamining the files related to tech upgrading, I think simply giving the pirates a new tech building that is a copy of E_Research_Center I can fix the problem. Pirates probably wont upgrade their tech but at least the Empire will do what it should. Expect an update sometime next week.